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usp34 lentiviral activation particles  (Santa Cruz Biotechnology)


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    Structured Review

    Santa Cruz Biotechnology usp34 lentiviral activation particles
    Deletion of <t>Usp34</t> results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.
    Usp34 Lentiviral Activation Particles, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 94/100, based on 196 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tfiid/TFIID+Antibody/pmc12861080-84-8-14
    Average 94 stars, based on 196 article reviews
    usp34 lentiviral activation particles - by Bioz Stars, 2026-09
    94/100 stars

    Images

    1) Product Images from "USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy"

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    Journal: JBMR Plus

    doi: 10.1093/jbmrpl/ziag004

    Deletion of Usp34 results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.
    Figure Legend Snippet: Deletion of Usp34 results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.

    Techniques Used: Staining, Modification, Micro-CT, Western Blot, Transfection, Expressing

    Deletion of Usp34 accelerates cartilage destruction during TMJ OA. (A) Representative images of Safranin O/Fast Green staining of SHAM and UBR-induced TMJ OA mice. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β.
    Figure Legend Snippet: Deletion of Usp34 accelerates cartilage destruction during TMJ OA. (A) Representative images of Safranin O/Fast Green staining of SHAM and UBR-induced TMJ OA mice. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β.

    Techniques Used: Staining, Modification, Micro-CT, Western Blot, Transfection, Expressing

    USP34 deficiency suppresses mitophagy. (A) Representative images of immunohistochemical staining of LC3, Parkin, and PINK1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (B and C) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. (D) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (E) ATDC5 cells stained with mitotracker and lysotracker transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm. (F) ATDC5 cells stained with Mito-SOX transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm.
    Figure Legend Snippet: USP34 deficiency suppresses mitophagy. (A) Representative images of immunohistochemical staining of LC3, Parkin, and PINK1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (B and C) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. (D) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (E) ATDC5 cells stained with mitotracker and lysotracker transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm. (F) ATDC5 cells stained with Mito-SOX transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm.

    Techniques Used: Immunohistochemical staining, Staining, Western Blot, Transfection, Membrane

    USP34 deubiquitinates and stabilizes ANT1. (A) Volcano plots showing the differentially expressed proteins of USP34-deficient cells from public proteomic dataset in the National Genomics Data Center under accession numbers: OMIX007639. (B) Heatmap showing the differentially expressed protein of USP34-deficient cells from public proteomic dataset (OMIX007639). (C and D) Representative images and quantitative analysis of western blot for ANT1 and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (E) Representative images of immunofluorescence staining of ANT1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (F) Co-immunoprecipitation of USP34 with ectopically expressed ANT1 in HEK293T cells. (G) Immunoblot of ANT1-linked polyubiquitin. HEK293T cells were treated with 10 μM MG132 for 4 h after transfection with the indicated constructs. The cell lysates were subjected to immunoprecipitation with the indicated antibody. (H) Measurement of ANT1 degradation rate. HEK293T cells were transfected with the indicated constructs and treated with 10 mg/mL CHX.
    Figure Legend Snippet: USP34 deubiquitinates and stabilizes ANT1. (A) Volcano plots showing the differentially expressed proteins of USP34-deficient cells from public proteomic dataset in the National Genomics Data Center under accession numbers: OMIX007639. (B) Heatmap showing the differentially expressed protein of USP34-deficient cells from public proteomic dataset (OMIX007639). (C and D) Representative images and quantitative analysis of western blot for ANT1 and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (E) Representative images of immunofluorescence staining of ANT1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (F) Co-immunoprecipitation of USP34 with ectopically expressed ANT1 in HEK293T cells. (G) Immunoblot of ANT1-linked polyubiquitin. HEK293T cells were treated with 10 μM MG132 for 4 h after transfection with the indicated constructs. The cell lysates were subjected to immunoprecipitation with the indicated antibody. (H) Measurement of ANT1 degradation rate. HEK293T cells were transfected with the indicated constructs and treated with 10 mg/mL CHX.

    Techniques Used: Western Blot, Transfection, Immunofluorescence, Staining, Immunoprecipitation, Construct

    ANT1 overexpression rescues mitochondrial homeostasis in USP34-deficient cells. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 , following exposure to IL-1β. (C) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 . Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (D) ATDC5 cells stained with mitotracker and lysotracker after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm. (E) ATDC5 cells stained with Mito-SOX after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm.
    Figure Legend Snippet: ANT1 overexpression rescues mitochondrial homeostasis in USP34-deficient cells. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 , following exposure to IL-1β. (C) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 . Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (D) ATDC5 cells stained with mitotracker and lysotracker after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm. (E) ATDC5 cells stained with Mito-SOX after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm.

    Techniques Used: Over Expression, Western Blot, Transfection, Membrane, Staining

    USP34 overexpression enhanced chondrocyte viability. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 lentiviral activation particles ( Usp34 ac) following exposure to IL-1β. (C and D) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells transfected with Usp34 ac following exposure to IL-1β. (E and F) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells with the indicated treatment. (G) ATDC5 cells stained with Acan and Col2a1 after transfection with Usp34 ac or Lv-ANT1 . Scale bars: 50 μm. (H and I) Relative mRNA expression of Acan and Col2a1 in ATDC5 cells with the indicated treatments.
    Figure Legend Snippet: USP34 overexpression enhanced chondrocyte viability. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 lentiviral activation particles ( Usp34 ac) following exposure to IL-1β. (C and D) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells transfected with Usp34 ac following exposure to IL-1β. (E and F) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells with the indicated treatment. (G) ATDC5 cells stained with Acan and Col2a1 after transfection with Usp34 ac or Lv-ANT1 . Scale bars: 50 μm. (H and I) Relative mRNA expression of Acan and Col2a1 in ATDC5 cells with the indicated treatments.

    Techniques Used: Over Expression, Western Blot, Transfection, Activation Assay, Staining, Expressing

    Related Articles

    Western Blot:

    Article Title: Clinacanthus nutans Mitigates Neuronal Death and Reduces Ischemic Brain Injury: Role of NF-κB-driven IL-1β Transcription.
    Article Snippet: Neuroinflammation has been shown to exacerbate ischemic brain injury, and is considered as a prime target for the development of stroke therapies.. Clinacanthus nutans Lindau (C. nutans) is widely used in traditional medicine for treating insect bites, viral infection and cancer, due largely to its anti-oxidative and anti-inflammatory properties.. Recently, we reported that an ethanol extract from the leaf of C. nutans could protect the brain against ischemia-triggered neuronal death and infarction.

    Article Title: Cleavage of the pseudoprotease iRhom2 by the signal peptidase complex reveals an ER-to-nucleus signalling pathway
    Article Snippet: Methodology is similar to retroviral transduction, with exception of packaging vectors (pCMV-VSV-G and pCMV-dR8.91) and selected with 2 μg/ml puromycin (Thermo Fischer Scientific, #A1113803). .. For immunoblotting and co-immunoprecipitation: Actin (Santa Cruz, #sc-47778; 1:5000), FLAG-HRP (Sigma Aldrich, #A8592; 1:4000), HA-HRP (Roche, #11867423001; 1:2000), KDEL (AbCam, #ab12223; 1:2000), iRhom2-NT-specific (( ); 1:500), Myc (Abcam, #ab9132; 1:2000), SEC11A (Proteintech, #14753-1-AP; 1:500), SEC11C (Novus Biologicals, NBP1-80774; 1:500), SPCS1 (Proteintech, #11847-1-AP; 1:500), SPCS2 (Merck Life Science, #HPA013386; 1:500), SPCS3 (Santa Cruz, sc-377334; 1:500), RHBDL4 (( ); 1:1000), POL2 (MBL International, MABI0601; 1:1000), TFIID (Santa Cruz, #sc-273; 1:1000), Histone H3 (Cell Signaling, #4499T; 1:4000), GRIN2D (Novus Biologicals, NBP2-94573; 1:1000), ZNF195 (Novus Biologicals, NBP2-93054; 1:1000), DDR1 (Cell Signaling, #5583T ; 1:1000), DDX3X (Cell Signaling, #3189S; 1:1000), ADAM17 (AbCam, #ab39162; 1:2000). .. For immunofluorescence: DAPI (Thermo Fischer, #D1306; 1 μg/ml), HA (Cell Signaling Technology, #3724; 1:500), HA.11 (Enzo Life Sciences, #ABS120-0200; 1:500), BAP31 (Enzo Life Sciences, #ALX-804-601-C100; 1:250), GFP (AbCam, #ab13970; 1:500), RHBDF2 (Sigma-Aldrich, #SAB1304414), SUN2 (Atlas Antibodies, HPA001209; 1:250)

    Blocking Assay:

    Article Title: Sustainable Grape Antioxidant Dietary Fiber Preserves Proximal Colonic Homeostasis via Hsp27 and AMPK Signaling.
    Article Snippet: Protein extracts (DC Protein Assay Kit, Bio-Rad, Madrid Spain) from each sample were separated by SDS–PAGE and transferred to polyvinylidene fluoride membranes (GE Healthcare, Madrid, Spain). .. After blocking, membranes were incubated overnight at 4 ◦C with primary antibodies against p21WAF1/Cip1 (F-5, sc-6246), p27Kip1 (F-8, sc-1641), cyclin E (HE12, sc-247), cyclin D1 (A-12, sc-8396), Bax (2D2, sc-20067), Bcl-2 (C-2, sc-7382), Bcl-xL (H-5, sc-8392), cytochrome c (A-8, sc-13156), AIF (E-1, sc-13116), Hsp70 (W27, sc-24), Hsp27 (F-4, sc-13132), AMPKα1/2 (D-6, sc-74461), p-AMPKThr172 (sc-33524), CPT1 (E-7, sc-393070), PCNA (PC10, sc-56), β-actin (C4, sc-47778; cytosolic control), TOM20 (F-10, sc-17764; mitochondrial control), and TFIID (58C9, sc-421; nuclear control) from Santa Cruz Biotechnology (anti-mouse; Quimigen, Madrid, Spain); p53 (DO-7, MA5-12557), p-p53Ser392 (44–640 G), and p-mTORSer2448 (44–1125 G) from Invitrogen (Thermo Fisher Scientific, Madrid, Spain; anti-rabbit); and p-RaptorSer792 (#2083) and p-ACCSer79 (#3661) from Cell Signaling Technology (anti-rabbit; Danvers, MA, USA). ..

    Article Title: Sustainable Grape Antioxidant Dietary Fiber Preserves Proximal Colonic Homeostasis via Hsp27 and AMPK Signaling
    Article Snippet: Protein extracts (DC Protein Assay Kit, Bio-Rad, Madrid Spain) from each sample were separated by SDS–PAGE and transferred to polyvinylidene fluoride membranes (GE Healthcare, Madrid, Spain). .. After blocking, membranes were incubated overnight at 4 °C with primary antibodies against p21 WAF1/Cip1 (F-5, sc-6246), p27 Kip1 (F-8, sc-1641), cyclin E (HE12, sc-247), cyclin D1 (A-12, sc-8396), Bax (2D2, sc-20067), Bcl-2 (C-2, sc-7382), Bcl-xL (H-5, sc-8392), cytochrome c (A-8, sc-13156), AIF (E-1, sc-13116), Hsp70 (W27, sc-24), Hsp27 (F-4, sc-13132), AMPKα1/2 (D-6, sc-74461), p-AMPK Thr172 (sc-33524), CPT1 (E-7, sc-393070), PCNA (PC10, sc-56), β-actin (C4, sc-47778; cytosolic control), TOM20 (F-10, sc-17764; mitochondrial control), and TFIID (58C9, sc-421; nuclear control) from Santa Cruz Biotechnology (anti-mouse; Quimigen, Madrid, Spain); p53 (DO-7, MA5-12557), p-p53 Ser392 (44–640 G), and p-mTOR Ser2448 (44–1125 G) from Invitrogen (Thermo Fisher Scientific, Madrid, Spain; anti-rabbit); and p-Raptor Ser792 (#2083) and p-ACC Ser79 (#3661) from Cell Signaling Technology (anti-rabbit; Danvers, MA, USA). ..

    Article Title: Oxidized LDL Downregulates ABCA1 Expression via MEK/ERK/LXR Pathway in INS-1 Cells
    Article Snippet: .. After blocking with skim milk, the membrane was incubated with the 1st antibody for ABCA1, LXR, TFIID, Lox-1 (Santa Cruz Biotechnology Inc., Dallas, CA, USA), or phospho-MEK, MEK, phospho-ERK1/2, ERK1/2 (Cell Signal Technology, Tokyo, Japan) at 4 °C overnight or GAPDH antibody (Biomol Research, Plymouth Meeting, Pennsylvania, USA) at room temperature for 1 h [ ]. .. The membrane was then incubated with the HRP-linked rabbit or mouse secondary antibody (DakoCytomation) at room temperature for 1 h. Protein bands were detected by ECL (GE Healthcare, Tokyo, Japan) under Luminescent image analyzer LAS-1000 Plus.

    Incubation:

    Article Title: Sustainable Grape Antioxidant Dietary Fiber Preserves Proximal Colonic Homeostasis via Hsp27 and AMPK Signaling.
    Article Snippet: Protein extracts (DC Protein Assay Kit, Bio-Rad, Madrid Spain) from each sample were separated by SDS–PAGE and transferred to polyvinylidene fluoride membranes (GE Healthcare, Madrid, Spain). .. After blocking, membranes were incubated overnight at 4 ◦C with primary antibodies against p21WAF1/Cip1 (F-5, sc-6246), p27Kip1 (F-8, sc-1641), cyclin E (HE12, sc-247), cyclin D1 (A-12, sc-8396), Bax (2D2, sc-20067), Bcl-2 (C-2, sc-7382), Bcl-xL (H-5, sc-8392), cytochrome c (A-8, sc-13156), AIF (E-1, sc-13116), Hsp70 (W27, sc-24), Hsp27 (F-4, sc-13132), AMPKα1/2 (D-6, sc-74461), p-AMPKThr172 (sc-33524), CPT1 (E-7, sc-393070), PCNA (PC10, sc-56), β-actin (C4, sc-47778; cytosolic control), TOM20 (F-10, sc-17764; mitochondrial control), and TFIID (58C9, sc-421; nuclear control) from Santa Cruz Biotechnology (anti-mouse; Quimigen, Madrid, Spain); p53 (DO-7, MA5-12557), p-p53Ser392 (44–640 G), and p-mTORSer2448 (44–1125 G) from Invitrogen (Thermo Fisher Scientific, Madrid, Spain; anti-rabbit); and p-RaptorSer792 (#2083) and p-ACCSer79 (#3661) from Cell Signaling Technology (anti-rabbit; Danvers, MA, USA). ..

    Article Title: Sustainable Grape Antioxidant Dietary Fiber Preserves Proximal Colonic Homeostasis via Hsp27 and AMPK Signaling
    Article Snippet: Protein extracts (DC Protein Assay Kit, Bio-Rad, Madrid Spain) from each sample were separated by SDS–PAGE and transferred to polyvinylidene fluoride membranes (GE Healthcare, Madrid, Spain). .. After blocking, membranes were incubated overnight at 4 °C with primary antibodies against p21 WAF1/Cip1 (F-5, sc-6246), p27 Kip1 (F-8, sc-1641), cyclin E (HE12, sc-247), cyclin D1 (A-12, sc-8396), Bax (2D2, sc-20067), Bcl-2 (C-2, sc-7382), Bcl-xL (H-5, sc-8392), cytochrome c (A-8, sc-13156), AIF (E-1, sc-13116), Hsp70 (W27, sc-24), Hsp27 (F-4, sc-13132), AMPKα1/2 (D-6, sc-74461), p-AMPK Thr172 (sc-33524), CPT1 (E-7, sc-393070), PCNA (PC10, sc-56), β-actin (C4, sc-47778; cytosolic control), TOM20 (F-10, sc-17764; mitochondrial control), and TFIID (58C9, sc-421; nuclear control) from Santa Cruz Biotechnology (anti-mouse; Quimigen, Madrid, Spain); p53 (DO-7, MA5-12557), p-p53 Ser392 (44–640 G), and p-mTOR Ser2448 (44–1125 G) from Invitrogen (Thermo Fisher Scientific, Madrid, Spain; anti-rabbit); and p-Raptor Ser792 (#2083) and p-ACC Ser79 (#3661) from Cell Signaling Technology (anti-rabbit; Danvers, MA, USA). ..

    Article Title: Oxidized LDL Downregulates ABCA1 Expression via MEK/ERK/LXR Pathway in INS-1 Cells
    Article Snippet: .. After blocking with skim milk, the membrane was incubated with the 1st antibody for ABCA1, LXR, TFIID, Lox-1 (Santa Cruz Biotechnology Inc., Dallas, CA, USA), or phospho-MEK, MEK, phospho-ERK1/2, ERK1/2 (Cell Signal Technology, Tokyo, Japan) at 4 °C overnight or GAPDH antibody (Biomol Research, Plymouth Meeting, Pennsylvania, USA) at room temperature for 1 h [ ]. .. The membrane was then incubated with the HRP-linked rabbit or mouse secondary antibody (DakoCytomation) at room temperature for 1 h. Protein bands were detected by ECL (GE Healthcare, Tokyo, Japan) under Luminescent image analyzer LAS-1000 Plus.

    Control:

    Article Title: Sustainable Grape Antioxidant Dietary Fiber Preserves Proximal Colonic Homeostasis via Hsp27 and AMPK Signaling.
    Article Snippet: Protein extracts (DC Protein Assay Kit, Bio-Rad, Madrid Spain) from each sample were separated by SDS–PAGE and transferred to polyvinylidene fluoride membranes (GE Healthcare, Madrid, Spain). .. After blocking, membranes were incubated overnight at 4 ◦C with primary antibodies against p21WAF1/Cip1 (F-5, sc-6246), p27Kip1 (F-8, sc-1641), cyclin E (HE12, sc-247), cyclin D1 (A-12, sc-8396), Bax (2D2, sc-20067), Bcl-2 (C-2, sc-7382), Bcl-xL (H-5, sc-8392), cytochrome c (A-8, sc-13156), AIF (E-1, sc-13116), Hsp70 (W27, sc-24), Hsp27 (F-4, sc-13132), AMPKα1/2 (D-6, sc-74461), p-AMPKThr172 (sc-33524), CPT1 (E-7, sc-393070), PCNA (PC10, sc-56), β-actin (C4, sc-47778; cytosolic control), TOM20 (F-10, sc-17764; mitochondrial control), and TFIID (58C9, sc-421; nuclear control) from Santa Cruz Biotechnology (anti-mouse; Quimigen, Madrid, Spain); p53 (DO-7, MA5-12557), p-p53Ser392 (44–640 G), and p-mTORSer2448 (44–1125 G) from Invitrogen (Thermo Fisher Scientific, Madrid, Spain; anti-rabbit); and p-RaptorSer792 (#2083) and p-ACCSer79 (#3661) from Cell Signaling Technology (anti-rabbit; Danvers, MA, USA). ..

    Article Title: Sustainable Grape Antioxidant Dietary Fiber Preserves Proximal Colonic Homeostasis via Hsp27 and AMPK Signaling
    Article Snippet: Protein extracts (DC Protein Assay Kit, Bio-Rad, Madrid Spain) from each sample were separated by SDS–PAGE and transferred to polyvinylidene fluoride membranes (GE Healthcare, Madrid, Spain). .. After blocking, membranes were incubated overnight at 4 °C with primary antibodies against p21 WAF1/Cip1 (F-5, sc-6246), p27 Kip1 (F-8, sc-1641), cyclin E (HE12, sc-247), cyclin D1 (A-12, sc-8396), Bax (2D2, sc-20067), Bcl-2 (C-2, sc-7382), Bcl-xL (H-5, sc-8392), cytochrome c (A-8, sc-13156), AIF (E-1, sc-13116), Hsp70 (W27, sc-24), Hsp27 (F-4, sc-13132), AMPKα1/2 (D-6, sc-74461), p-AMPK Thr172 (sc-33524), CPT1 (E-7, sc-393070), PCNA (PC10, sc-56), β-actin (C4, sc-47778; cytosolic control), TOM20 (F-10, sc-17764; mitochondrial control), and TFIID (58C9, sc-421; nuclear control) from Santa Cruz Biotechnology (anti-mouse; Quimigen, Madrid, Spain); p53 (DO-7, MA5-12557), p-p53 Ser392 (44–640 G), and p-mTOR Ser2448 (44–1125 G) from Invitrogen (Thermo Fisher Scientific, Madrid, Spain; anti-rabbit); and p-Raptor Ser792 (#2083) and p-ACC Ser79 (#3661) from Cell Signaling Technology (anti-rabbit; Danvers, MA, USA). ..

    Ubiquitin Proteomics:

    Article Title: BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ
    Article Snippet: The primary antibodies obtained for Bethyl Laboratories were as follows: BRCA1 (A300-000A), BARD1 (A300-263A), phosphorylated BRCA1 at S1524 (A300-001A), MED23 (A300-425A), and TOP2B (A300-949A). .. The antibodies for α -Tubulin (sc-8035), TOP2B (sc-25330), TFIID (sc-421), TFIIF (sc-37430), TFIIE α (sc-133065), CDK9 (sc-13130, and Ubiquitin (sc-8017) were from Santa Cruz Biotechnology. .. ELK1 (#91825) and Pol II (#2629) were purchased from Cell Signaling Technology.

    Article Title: BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ
    Article Snippet: The primary antibodies obtained from Bethyl Laboratories were as follows: BRCA1 (A300-000A), BARD1 (A300-263A), phosphorylated BRCA1 at S1524 (A300-001A), MED23 (A300-425A) and TOP2B (A300-949A). .. The antibodies for α-tubulin (sc-8035), TOP2B (sc-25330), TFIID (sc-421), TFIIF (sc-37430), TFIIE α (sc-133065), CDK9 (sc-13130) and ubiquitin (sc-8017) were from Santa Cruz Biotechnology. .. ELK1 (no. 91825) and Pol II (no. 2629) were purchased from Cell Signaling Technology.

    other:

    Article Title: NET-prism enables RNA polymerase-dedicated transcriptional interrogation at nucleotide resolution
    Article Snippet: Antibodies used in this study: Spt6 (Cell Signalling – D6J9H); Ssrp1 (Biolegends – 10D1); TFIID (Santa Cruz – sc-273); Med14 (Invitrogen – PA5-44864), Total Pol II (anti-CTD, ab817 – Abcam), Sf1 (A303-214A; Bethyl).

    Membrane:

    Article Title: Oxidized LDL Downregulates ABCA1 Expression via MEK/ERK/LXR Pathway in INS-1 Cells
    Article Snippet: .. After blocking with skim milk, the membrane was incubated with the 1st antibody for ABCA1, LXR, TFIID, Lox-1 (Santa Cruz Biotechnology Inc., Dallas, CA, USA), or phospho-MEK, MEK, phospho-ERK1/2, ERK1/2 (Cell Signal Technology, Tokyo, Japan) at 4 °C overnight or GAPDH antibody (Biomol Research, Plymouth Meeting, Pennsylvania, USA) at room temperature for 1 h [ ]. .. The membrane was then incubated with the HRP-linked rabbit or mouse secondary antibody (DakoCytomation) at room temperature for 1 h. Protein bands were detected by ECL (GE Healthcare, Tokyo, Japan) under Luminescent image analyzer LAS-1000 Plus.



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    94
    Santa Cruz Biotechnology usp34 lentiviral activation particles
    Deletion of <t>Usp34</t> results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.
    Usp34 Lentiviral Activation Particles, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Santa Cruz Biotechnology tfiid tata binding protein tbp 1tb18
    Deletion of <t>Usp34</t> results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.
    Tfiid Tata Binding Protein Tbp 1tb18, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tfiid/TFIID+Antibody/pmc12905330-28-0-5
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    Santa Cruz Biotechnology tbp
    ( A ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with empty vector (pcDNA), MDM2 wild-type (WT), MDM2 464 A or MDM2 395 A for 48 h. Then, NICD levels in the chromatin fraction were analyzed by western blotting after cell fractionation ( n = 3). <t>TBP:</t> loading control for the chromatin fraction. ( B ) 293T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS), empty vector (pcDNA), MDM2 WT, MDM2 464 A or MDM2 395 A for 48 h followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 1). INPUT: total cell extracts. TBP was used as control loading in INPUT. Graph shows the quantification of NICD signal in each pulldown fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to the signal in lane 2 (empty vector) set at 100%. <t>For</t> <t>p53,</t> the signal in MDM-395A-expressing cells was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pulldown negative control (without ubiquitin). ( C ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS) wild-type (WT) or K48R mutant, in combination with empty vector (pcDNA) or MDM2 WT for 48 h, followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 2). INPUT: total cell extracts. TBP was used as loading control in INPUT. Graph shows the quantification of the NICD signal in the pull-down fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pull-down negative control (without ubiquitin expression). In the legend, n indicates the number of biological replicates. .
    Tbp, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Santa Cruz Biotechnology tfiid
    ( A ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with empty vector (pcDNA), MDM2 wild-type (WT), MDM2 464 A or MDM2 395 A for 48 h. Then, NICD levels in the chromatin fraction were analyzed by western blotting after cell fractionation ( n = 3). <t>TBP:</t> loading control for the chromatin fraction. ( B ) 293T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS), empty vector (pcDNA), MDM2 WT, MDM2 464 A or MDM2 395 A for 48 h followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 1). INPUT: total cell extracts. TBP was used as control loading in INPUT. Graph shows the quantification of NICD signal in each pulldown fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to the signal in lane 2 (empty vector) set at 100%. <t>For</t> <t>p53,</t> the signal in MDM-395A-expressing cells was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pulldown negative control (without ubiquitin). ( C ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS) wild-type (WT) or K48R mutant, in combination with empty vector (pcDNA) or MDM2 WT for 48 h, followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 2). INPUT: total cell extracts. TBP was used as loading control in INPUT. Graph shows the quantification of the NICD signal in the pull-down fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pull-down negative control (without ubiquitin expression). In the legend, n indicates the number of biological replicates. .
    Tfiid, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tfiid/TFIID+Antibody/pm41226602-189-71-77
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    Image Search Results


    Deletion of Usp34 results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.

    Journal: JBMR Plus

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    doi: 10.1093/jbmrpl/ziag004

    Figure Lengend Snippet: Deletion of Usp34 results in age-related TMJ degeneration. (A) Representative images of Safranin O/Fast Green staining of Usp34 icKO mice at postanal (PN) 3 months (M) and 12 M. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA.

    Article Snippet: For Usp34 overexpression, ATDC5 cells were transduced with Usp34 lentiviral activation particles (sc-421 760-LAC; Santa Cruz Biotechnology).

    Techniques: Staining, Modification, Micro-CT, Western Blot, Transfection, Expressing

    Deletion of Usp34 accelerates cartilage destruction during TMJ OA. (A) Representative images of Safranin O/Fast Green staining of SHAM and UBR-induced TMJ OA mice. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β.

    Journal: JBMR Plus

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    doi: 10.1093/jbmrpl/ziag004

    Figure Lengend Snippet: Deletion of Usp34 accelerates cartilage destruction during TMJ OA. (A) Representative images of Safranin O/Fast Green staining of SHAM and UBR-induced TMJ OA mice. Scale bars: 100 μm for low and 50 μm for high magnification. (B and C) Quantitative analysis regarding cartilage thickness and modified Mankin score according to Safranin O/Fast Green staining. n = 6 per group. (D) Representative micro-CT images reveal the subchondral bone microstructure. Scale bars: 100 μm. (E) Quantitative analysis of subchondral bone parameters. (F and G) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (H) Relative mRNA expression of MMP3, MMP13, ADAMTS4, and ADAMTS5 in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β.

    Article Snippet: For Usp34 overexpression, ATDC5 cells were transduced with Usp34 lentiviral activation particles (sc-421 760-LAC; Santa Cruz Biotechnology).

    Techniques: Staining, Modification, Micro-CT, Western Blot, Transfection, Expressing

    USP34 deficiency suppresses mitophagy. (A) Representative images of immunohistochemical staining of LC3, Parkin, and PINK1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (B and C) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. (D) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (E) ATDC5 cells stained with mitotracker and lysotracker transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm. (F) ATDC5 cells stained with Mito-SOX transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm.

    Journal: JBMR Plus

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    doi: 10.1093/jbmrpl/ziag004

    Figure Lengend Snippet: USP34 deficiency suppresses mitophagy. (A) Representative images of immunohistochemical staining of LC3, Parkin, and PINK1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (B and C) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. (D) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA following exposure to CCCP. Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (E) ATDC5 cells stained with mitotracker and lysotracker transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm. (F) ATDC5 cells stained with Mito-SOX transfected with Usp34 siRNA following exposure to CCCP. Scale bars: 20 μm.

    Article Snippet: For Usp34 overexpression, ATDC5 cells were transduced with Usp34 lentiviral activation particles (sc-421 760-LAC; Santa Cruz Biotechnology).

    Techniques: Immunohistochemical staining, Staining, Western Blot, Transfection, Membrane

    USP34 deubiquitinates and stabilizes ANT1. (A) Volcano plots showing the differentially expressed proteins of USP34-deficient cells from public proteomic dataset in the National Genomics Data Center under accession numbers: OMIX007639. (B) Heatmap showing the differentially expressed protein of USP34-deficient cells from public proteomic dataset (OMIX007639). (C and D) Representative images and quantitative analysis of western blot for ANT1 and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (E) Representative images of immunofluorescence staining of ANT1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (F) Co-immunoprecipitation of USP34 with ectopically expressed ANT1 in HEK293T cells. (G) Immunoblot of ANT1-linked polyubiquitin. HEK293T cells were treated with 10 μM MG132 for 4 h after transfection with the indicated constructs. The cell lysates were subjected to immunoprecipitation with the indicated antibody. (H) Measurement of ANT1 degradation rate. HEK293T cells were transfected with the indicated constructs and treated with 10 mg/mL CHX.

    Journal: JBMR Plus

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    doi: 10.1093/jbmrpl/ziag004

    Figure Lengend Snippet: USP34 deubiquitinates and stabilizes ANT1. (A) Volcano plots showing the differentially expressed proteins of USP34-deficient cells from public proteomic dataset in the National Genomics Data Center under accession numbers: OMIX007639. (B) Heatmap showing the differentially expressed protein of USP34-deficient cells from public proteomic dataset (OMIX007639). (C and D) Representative images and quantitative analysis of western blot for ANT1 and α-tubulin in ATDC5 cells transfected with Usp34 siRNA following exposure to IL-1β. (E) Representative images of immunofluorescence staining of ANT1 in the TMJ cartilages of SHAM and UBR-induced TMJ OA mice. Scale bars: 50 μm. (F) Co-immunoprecipitation of USP34 with ectopically expressed ANT1 in HEK293T cells. (G) Immunoblot of ANT1-linked polyubiquitin. HEK293T cells were treated with 10 μM MG132 for 4 h after transfection with the indicated constructs. The cell lysates were subjected to immunoprecipitation with the indicated antibody. (H) Measurement of ANT1 degradation rate. HEK293T cells were transfected with the indicated constructs and treated with 10 mg/mL CHX.

    Article Snippet: For Usp34 overexpression, ATDC5 cells were transduced with Usp34 lentiviral activation particles (sc-421 760-LAC; Santa Cruz Biotechnology).

    Techniques: Western Blot, Transfection, Immunofluorescence, Staining, Immunoprecipitation, Construct

    ANT1 overexpression rescues mitochondrial homeostasis in USP34-deficient cells. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 , following exposure to IL-1β. (C) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 . Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (D) ATDC5 cells stained with mitotracker and lysotracker after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm. (E) ATDC5 cells stained with Mito-SOX after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm.

    Journal: JBMR Plus

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    doi: 10.1093/jbmrpl/ziag004

    Figure Lengend Snippet: ANT1 overexpression rescues mitochondrial homeostasis in USP34-deficient cells. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 , following exposure to IL-1β. (C) Representative TEM images of ATDC5 cells transfected with Usp34 siRNA or Lv-ANT1 . Subcellular structures with discernible mitochondria (yellow arrows) and bound by a double limiting membrane are identified as putative mitophagosome structures (red arrows). Scale bars: 200 nm. (D) ATDC5 cells stained with mitotracker and lysotracker after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm. (E) ATDC5 cells stained with Mito-SOX after transfection with Usp34 siRNA or Lv-ANT1 . Scale bars: 20 μm.

    Article Snippet: For Usp34 overexpression, ATDC5 cells were transduced with Usp34 lentiviral activation particles (sc-421 760-LAC; Santa Cruz Biotechnology).

    Techniques: Over Expression, Western Blot, Transfection, Membrane, Staining

    USP34 overexpression enhanced chondrocyte viability. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 lentiviral activation particles ( Usp34 ac) following exposure to IL-1β. (C and D) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells transfected with Usp34 ac following exposure to IL-1β. (E and F) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells with the indicated treatment. (G) ATDC5 cells stained with Acan and Col2a1 after transfection with Usp34 ac or Lv-ANT1 . Scale bars: 50 μm. (H and I) Relative mRNA expression of Acan and Col2a1 in ATDC5 cells with the indicated treatments.

    Journal: JBMR Plus

    Article Title: USP34 attenuates cartilage degradation in temporomandibular joint osteoarthritis by ANT1-mediated mitophagy

    doi: 10.1093/jbmrpl/ziag004

    Figure Lengend Snippet: USP34 overexpression enhanced chondrocyte viability. (A and B) Representative images and quantitative analysis of western blot for LC3, Parkin, PINK1, and α-tubulin in ATDC5 cells transfected with Usp34 lentiviral activation particles ( Usp34 ac) following exposure to IL-1β. (C and D) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells transfected with Usp34 ac following exposure to IL-1β. (E and F) Representative images and quantitative analysis of western blot for MMP13, ADAMTS5, and α-tubulin in ATDC5 cells with the indicated treatment. (G) ATDC5 cells stained with Acan and Col2a1 after transfection with Usp34 ac or Lv-ANT1 . Scale bars: 50 μm. (H and I) Relative mRNA expression of Acan and Col2a1 in ATDC5 cells with the indicated treatments.

    Article Snippet: For Usp34 overexpression, ATDC5 cells were transduced with Usp34 lentiviral activation particles (sc-421 760-LAC; Santa Cruz Biotechnology).

    Techniques: Over Expression, Western Blot, Transfection, Activation Assay, Staining, Expressing

    ( A ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with empty vector (pcDNA), MDM2 wild-type (WT), MDM2 464 A or MDM2 395 A for 48 h. Then, NICD levels in the chromatin fraction were analyzed by western blotting after cell fractionation ( n = 3). TBP: loading control for the chromatin fraction. ( B ) 293T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS), empty vector (pcDNA), MDM2 WT, MDM2 464 A or MDM2 395 A for 48 h followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 1). INPUT: total cell extracts. TBP was used as control loading in INPUT. Graph shows the quantification of NICD signal in each pulldown fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to the signal in lane 2 (empty vector) set at 100%. For p53, the signal in MDM-395A-expressing cells was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pulldown negative control (without ubiquitin). ( C ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS) wild-type (WT) or K48R mutant, in combination with empty vector (pcDNA) or MDM2 WT for 48 h, followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 2). INPUT: total cell extracts. TBP was used as loading control in INPUT. Graph shows the quantification of the NICD signal in the pull-down fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pull-down negative control (without ubiquitin expression). In the legend, n indicates the number of biological replicates. .

    Journal: EMBO Molecular Medicine

    Article Title: NOTCH1 intracellular domain stabilization by MDM2 plays a major role in NSCLC response to platinum

    doi: 10.1038/s44321-025-00354-9

    Figure Lengend Snippet: ( A ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with empty vector (pcDNA), MDM2 wild-type (WT), MDM2 464 A or MDM2 395 A for 48 h. Then, NICD levels in the chromatin fraction were analyzed by western blotting after cell fractionation ( n = 3). TBP: loading control for the chromatin fraction. ( B ) 293T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS), empty vector (pcDNA), MDM2 WT, MDM2 464 A or MDM2 395 A for 48 h followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 1). INPUT: total cell extracts. TBP was used as control loading in INPUT. Graph shows the quantification of NICD signal in each pulldown fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to the signal in lane 2 (empty vector) set at 100%. For p53, the signal in MDM-395A-expressing cells was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pulldown negative control (without ubiquitin). ( C ) 293 T cells were transfected with NOTCH1-DeltaEx and then co-transfected with 6xtag-His-ubiquitin (UB-HIS) wild-type (WT) or K48R mutant, in combination with empty vector (pcDNA) or MDM2 WT for 48 h, followed by histidine affinity pull-down (pulldown HIS-Ub) and western blotting ( n = 2). INPUT: total cell extracts. TBP was used as loading control in INPUT. Graph shows the quantification of the NICD signal in the pull-down fraction relative to the UB-HIS signal in the same fraction. Then, NICD signal in each lane was normalized to that in lane 3 (MDM2 WT) set at 100%. Lane 1 is the pull-down negative control (without ubiquitin expression). In the legend, n indicates the number of biological replicates. .

    Article Snippet: Proteins were separated by SDS-PAGE, transferred to PVDF membranes, and analyzed using the following antibodies against: NICD (#4147, 1:500), phosphorylated ATM (#13050, 1:1000), ATM (#2873S, 1:1000), phosphorylated ATR (#2853, 1:1000), ATR (#2790S, 1:1000), JAG1 (70109S, 1:1000), JAG2 (2210T, 1:1000), DLL3 (78110S 1:1000), DLL4 (96406S, 1:1000), full length NOTCH1 (3608S, 1:1000), GAPDH (2118S, 1:5000), and H3 (59715S, 1:5000) (all from Cell Signaling Technology, Inc) and also DLL1 (QC16739-41705, Antiva Biosciences, 1:1000), MDM2 (#4B2C1.11 and #4B11 Merck Millipore, 1:2000), TUBULIN (#T9026, Sigma, 1:10,000), polyhistidine (H1029 Sigma, 1:1000), p53 (sc-126 Santa Cruz Technology, 1:1000), TBP (TFIID sc-56794, Santa Cruz Technology, 1:500), HSC70 (sc-7298 Santa Cruz Technology, 1:1000), and HEY1 (#19929 Proteintech 1:1000).

    Techniques: Transfection, Plasmid Preparation, Western Blot, Cell Fractionation, Control, Ubiquitin Proteomics, Expressing, Negative Control, Mutagenesis